BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029C03LP1|AL429027
(844 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1568 1575 0.0
>3x_Contig1568
Length = 12470
Score = 1575 bits (786), Expect = 0.0
Identities = 826/846 (97%), Gaps = 2/846 (0%)
Strand = Plus / Minus
Query: 1 acaattgcattaaagcaaaatagtgctgtaaggaaaaacgatacaatccggcattgcaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1646 acaattgcattaaagcaaaatagtgctgtaaggaaaaacgatacaatccggcattgcaca 1587
Query: 61 tcaagggtttgcagttttcataaccgaaaagtaagcatcaaccgcccagtatttatatac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1586 tcaagggtttgcagttttcataaccgaaaagtaagcatcaaccgcccagtatttatatac 1527
Query: 121 tatgtaggactgatagaaaagtggacaggattccaagttttatctcggtgtagatactat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1526 tatgtaggactgatagaaaagtggacaggattccaagttttatctcggtgtagatactat 1467
Query: 181 ttaaccattattaccaattttgcgggtatcttgttgcaatcaggcgcactttaacttccg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1466 ttaaccattattaccaattttgcgggtatcttgttgcaatcaggcgcactttaacttccg 1407
Query: 241 actttccaccttaagcttttttttttccttcgccctacgcttaatacagtgtcgtgaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1406 actttccaccttaagcttttttttttccttcgccctacgcttaatacagtgtcgtgaaaa 1347
Query: 301 tgaaaaagagccagtcctcgaattagccgattccaattaatattgatatcaatggcaagg 360
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1346 tgaaaaagagccagtactcgaattagccgattccaattaatattgatatcaatggcaagg 1287
Query: 361 gaaatactgcaattggaagcgacacaacgagcgagatatgtgatgcgagcgtaggcgctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1286 gaaatactgcaattggaagcgacacaacgagcgagatatgtgatgcgagcgtaggcgctg 1227
Query: 421 attagaatggtgccgcgattaamataactcccggttctggctcatttctttcaattgtaa 480
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1226 attagaatggtgccgcgattaaaataactcccggttctggctcatttctttcaattgtaa 1167
Query: 481 cggtgttgcccaagcggaggcttcagggaaagggcaacgccagggcaggaaatatttgtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1166 cggtgttgcccaagcggaggcttcagggaaagggcaacgccagggcaggaaatatttgtt 1107
Query: 541 acccggttcacgttatggtacttttatctcaatactggaatgcagcaagggaaaagtata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1106 acccggttcacgttatggtacttttatctcaatactggaatgcagcaagggaaaagtata 1047
Query: 601 taggtcattatggatcacgtgatttatatgttgcgtataagtatgttgacacgattgatt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1046 taggtcattatggatcacgtgatttatatgttgcgtataagtatgttgacacgattgatt 987
Query: 661 cgttaccactatatatatatatatatatattkgkkggrgkattaaggggggama-cacct 719
||||||||||||||||||||||||||||||| | | | ||||||| || | | |||||
Sbjct: 986 cgttaccactatatatatatatatatatatttgttgaagtattaaggtggtacaccacct 927
Query: 720 ttacattawattataratcgttcactgttaawcytttctttgttgcmtcttgaaat-cma 778
|||||||| |||||| ||||||||||||||| | |||||||||||| ||||||||| | |
Sbjct: 926 ttacattatattatagatcgttcactgttaatcttttctttgttgcatcttgaaatccaa 867
Query: 779 actttcatacttaaaatgacatattccgttttcaatgtwaaatattcggagcgatttagc 838
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 866 actttcatacttaaaatgacatattccgttttcaatgttaaatattcggagcgatttagc 807
Query: 839 agcagt 844
||||||
Sbjct: 806 agcagt 801
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,707
Number of Sequences: 1807
Number of extensions: 12707
Number of successful extensions: 3034
Number of sequences better than 1.0e-20: 1
length of query: 844
length of database: 10,358,551
effective HSP length: 16
effective length of query: 828
effective length of database: 10,329,639
effective search space: 8552941092
effective search space used: 8552941092
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.5 bits)
S2: 50 (100.7 bits)